Reference Overview - PMID22006338

Overview

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Reference

Loss-of-function mutations in Notch receptors in cutaneous and lung squamous cell carcinoma.

Paper Id
COSP27258
Authors
Wang NJ,Sanborn Z,Arnett KL,Bayston LJ,Liao W,Proby CM,Leigh IM,Collisson EA,Gordon PB,Jakkula L,Pennypacker S,Zou Y,Sharma M,North JP,Vemula SS,Mauro TM,Neuhaus IM,Leboit PE,Hur JS,Park K,Huh N,Kwok PY,Arron ST,Massion PP,Bale AE,Haussler D,Cleaver JE,Gray JW,Spellman PT,South AP,Aster JC,Blacklow SC and Cho RJ
Affiliation
Life Sciences Division, Lawrence Berkeley National Laboratory, Berkeley, CA 94720, USA.
Journal
Proceedings of the National Academy of Sciences of the United States of America 2011;108(43):17761-6
ISSN:1091-6490
PUBMED:22006338
Abstract
Squamous cell carcinomas (SCCs) are one of the most frequent forms of human malignancy, but, other than TP53 mutations, few causative somatic aberrations have been identified. We identified NOTCH1 or NOTCH2 mutations in ~75% of cutaneous SCCs and in a lesser fraction of lung SCCs, defining a spectrum for the most prevalent tumor suppressor specific to these epithelial malignancies. Notch receptors normally transduce signals in response to ligands on neighboring cells, regulating metazoan lineage selection and developmental patterning. Our findings therefore illustrate a central role for disruption of microenvironmental communication in cancer progression. NOTCH aberrations include frameshift and nonsense mutations leading to receptor truncations as well as point substitutions in key functional domains that abrogate signaling in cell-based assays. Oncogenic gain-of-function mutations in NOTCH1 commonly occur in human T-cell lymphoblastic leukemia/lymphoma and B-cell chronic lymphocytic leukemia. The bifunctional role of Notch in human cancer thus emphasizes the context dependency of signaling outcomes and suggests that targeted inhibition of the Notch pathway may induce squamous epithelial malignancies.
Paper Status
Curated
Genes Analysed
4
Mutations
45

Mutations

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Genes Samples CDS Mutation AA Mutation

Non-Mutant Genes

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Non-Mutant Genes Gene Id (COSG)

Non-Mutant Samples

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Non-Mutant Samples Sample Id (COSS)

Mutated Samples

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Sample Name Mutation Count

Non-Coding mutation

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Sample ID Sample Name ID NCV Annotation Zygosity Chromosome Genome start Genome stop Genome version Strand WT seq Mut seq