GRCh38 · COSMIC v99

Overview

This tab shows an overview of the data that we have for this sample. You can read more about these data on our help pages.

Sample information
Sample name
CA9-22
COSMIC sample ID
COSS1317411
Tumour location
Upper aerodigestive tract; Head neck (Carcinoma; Squamous cell carcinoma)
View this tissue/histology in the Cancer Browser
Screening method
n/a
Source
Sample type
Cultured Sample
Cell line source
Origin of cultured sample e.g. metastasis
NS
Sample source
Description of sample e.g. surgery-fixed, blood-bone marrow
cell-line
Curated features
Sample details
n/a
Tumour details
n/a
Individual details
Gender
Unknown
Normal tissue tested
Unknown
Age
Unknown
Additional information
Microsatellite instability (MSI)
Unknown
Other samples linked to the same individual
n/a
Supplier
n/a
External links
n/a
STR profile data
n/a
Sequence statistics
n/a

Circos

Circos plots are available only for samples sequenced using whole genome screening.

Genome browser

The genome browser is available only for samples sequenced using whole genome screening.

Variants

This tab shows the mutations observed in this sample. See more information in our help pages.

Gene Transcript Census Tier 1 AA Mutation CDS Mutation Somatic status Zygosity Validated Type Position

Mutation Filters
This tab shows the mutations observed in this sample [more details]
Gene CDS Mutation Somatic status Zygosity Validated Type

Mutation spectrum

This tab shows the mutation spectrum observed in this sample. Read more in our help pages.

There is no mutation spectrum data for this sample.

Sequence context

Only available in the cell lines site.

Heatmap

Only available in the cell lines site.

Non-mutant genes

This tab shows the genes with no mutations in this sample. You can read more in our help pages.

Gene name Id Gene

References

This tab shows the publications associated with this sample. You can read more in our help pages.

Reference Title Author Year Journal Status COSMIC Pubmed